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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888271.1_cds_XP_016442834.1_38055
CDS Infomation

[gene=LOC107768238] [db_xref=GeneID:107768238] [protein=sodium/hydrogen exchanger 1-like] [protein_id=XP_016442834.1] [location=join(42145..42318,42612..42730,43814..43911,44841..44900,44996..45042,45117..45311,45445..45491,45722..45788,45874..45974,46309..46410,46533..46671,46747..46809,46949..47032,47156..47470)] [gbkey=CDS]
Sequence

ATGGCGTCTGAGCTGGCTTCTATGTTTCCAAAACTGGGCTCTTTGGGTACTTCAGATCAT
GGTTCTGTTGTATCCATCAACCTCTTTGTGGCACTCCTTTGCGCTTGCATTGTCATTGGT
CATCTGCTGGAGGAGAACCGCTGGATAAATGAGTCCATTACCGCCCTCATAATTGGCTTG
GGTGTAGGAGTTGTTATCTTGCTCATAAGTGGGGGAAAGAGCTCACACGTTCTGGTCTTC
AGTGAAGATCTCTTTTTCATATATCTACTTCCTCCAATCATATTTAATGCAGGGTTTCAG
GTAAAAAAGAAGCAATTTTTCGTAAACTTCATTACTATAATGCTGTTCGGAGCCATTGGT
ACACTGATCTCATGTGCCATTATATCATTAGGTGCCATTAAATTCTTCAAGAAGTTGGAC
ATTGGATTTCTAGATATTGGGGATTATCTCGCAATTGGAGCAATATTTGCTGCCACAGAC
TCCGTCTGCACGTTGCAGGTCCTACATCAGGATGAGACACCCCTCCTTTACAGTCTTGTA
TTTGGAGAAGGAGTTGTTAATGATGCTACATCGGTGGTGCTTTTCAATGCTATTCAAAAC
TTTGACCTTTCGAGCGTGAATCCCACTATTGCCCTTCGTTTCATTGGCAACTTCTTATAT
CTGTTCCTTGCTAGCACTTTACTGGGAGCAGCAACTGGTCTTCTTAGTGCTTACATTGTC
AAGAAGCTGTATTTTGGCAGGCATTCCACAGATCGCGAGGTTGCACTTATGATGCTCATG
GCTTACTTATCATACATGTTGGCTGAACTATTCTATTTCAGTGGGATTCTCACTGTATTT
TTCTGTGGTATTGTAATGTCCCATTACACTTGGCACAATGTGACTGAGAGTTCAAGAGTC
ACTACAAGGCACACTTTTGCAACTTTGTCATTTCTTGCTGAGACTTTCCTCTTCCTCTAT
GTCGGTATGGATGCCTTGGATATCGAGAAGTGGAAATTTGTTAGTGATAGTCCTGGATTA
TCCGTTGCAGTAAGTTCGATACTGATGGGACTAATCTTGCTAGGGAGAGCTGCCTTTGTT
TTTCCATTATCATTCTTATCCAACTTGATGAAGAAATCCTCAGAGGAAAAAATTACCTTT
AGGCAGCAAGTGATAATATGGTGGGCAGGTTTGATGAGAGGTGCAGTGTCCATGGCACTG
GCATATAATAAGTTCACTCGTTTGGGACACACTCAATTGCAAGACAACGCAATAATGATC
ACCAGCACCATTACCATTGTTCTTTTCAGCACAGTGGTATTTGGTTTAATGACAAAACCT
CTTATAAGTCTCCTGCTGCCACCGCAGAGGCAGTTAAGTACAGTGTCATCAGATGCAAAT
ACTCCAAAATCTCTTACAGCACCACTTCTAGGCAGTCAAGAGGGTTCTGAAGTCGATTTA
AATAGTCAAGATCTTCCTCACCCACCCAGTTTGAGGATGCTACTTTCTGCGCCAACTCAT
AAGGTGCATAGGTACTGGCGCAAGTTTGATGATTCATTCATGCGCCCGGTGTTTGGTGGT
CGGGGGTTTACTCCTGTTGCTCCTGGTTCTCCAACGGAACAGGAACCATGA

Peptide Sequence

PEP ID

XP_016442834.1
PEP Infomation

PREDICTED: sodium/hydrogen exchanger 1-like [Nicotiana tabacum]
Sequence

MASELASMFPKLGSLGTSDHGSVVSINLFVALLCACIVIGHLLEENRWINESITALIIGL
GVGVVILLISGGKSSHVLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMLFGAIG
TLISCAIISLGAIKFFKKLDIGFLDIGDYLAIGAIFAATDSVCTLQVLHQDETPLLYSLV
FGEGVVNDATSVVLFNAIQNFDLSSVNPTIALRFIGNFLYLFLASTLLGAATGLLSAYIV
KKLYFGRHSTDREVALMMLMAYLSYMLAELFYFSGILTVFFCGIVMSHYTWHNVTESSRV
TTRHTFATLSFLAETFLFLYVGMDALDIEKWKFVSDSPGLSVAVSSILMGLILLGRAAFV
FPLSFLSNLMKKSSEEKITFRQQVIIWWAGLMRGAVSMALAYNKFTRLGHTQLQDNAIMI
TSTITIVLFSTVVFGLMTKPLISLLLPPQRQLSTVSSDANTPKSLTAPLLGSQEGSEVDL
NSQDLPHPPSLRMLLSAPTHKVHRYWRKFDDSFMRPVFGGRGFTPVAPGSPTEQEP

Transcript Sequence

Gene sequence data has not been registered.